Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MIR658-201ENST00000385210 100 ntBASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 FO393414.2-201ENST00000405153 598 ntBASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 TARDBPP1-201ENST00000442013 1203 ntBASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 AC119751.2-201ENST00000504529 210 ntBASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 AL162274.1-201ENST00000617191 1098 ntBASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 KRT8P37-201ENST00000451609 1420 ntBASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 RPL13P2-201ENST00000440687 659 ntBASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 TIMM17BP1-201ENST00000545713 516 ntBASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 AL158212.4-201ENST00000624062 1286 ntBASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX49Q9Y6V7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 AC011495.1-201ENST00000498085 584 ntBASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 RARRES2P5-201ENST00000564013 466 ntBASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 AC008735.3-201ENST00000596646 500 ntBASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 AL512343.1-201ENST00000605837 169 ntBASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms