Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLIC4Q9Y696 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 ACKR1-201ENST00000368121 1240 ntBASIC17.1■□□□□ 0.33
CLIC4Q9Y696 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 ENPP7P5-201ENST00000541031 1031 ntBASIC17.1■□□□□ 0.33
CLIC4Q9Y696 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 AP001063.1-201ENST00000568332 529 ntBASIC17.1■□□□□ 0.33
CLIC4Q9Y696 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 CU634019.7-201ENST00000624153 1185 ntBASIC17.1■□□□□ 0.33
CLIC4Q9Y696 FP236241.2-201ENST00000624906 1185 ntBASIC17.1■□□□□ 0.33
CLIC4Q9Y696 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLIC4Q9Y696 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 AC007969.1-201ENST00000433675 447 ntBASIC17.09■□□□□ 0.33
CLIC4Q9Y696 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 AC190387.1-201ENST00000551683 408 ntBASIC17.09■□□□□ 0.33
CLIC4Q9Y696 KRT8P35-201ENST00000483942 1338 ntBASIC17.09■□□□□ 0.33
CLIC4Q9Y696 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLIC4Q9Y696 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLIC4Q9Y696 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms