Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 AC078819.1-201ENST00000547454 765 ntBASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 AC012085.1-201ENST00000548270 765 ntBASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 AC138951.2-201ENST00000623455 1161 ntBASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI2Q9Y5P3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 FAM21FP-201ENST00000426241 1131 ntBASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 RPL7P3-201ENST00000441388 714 ntBASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 PFN1P12-201ENST00000455938 534 ntBASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 AP000812.2-201ENST00000538934 718 ntBASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.18■□□□□ 0.02
RAI2Q9Y5P3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 CICP23-201ENST00000605013 2741 ntBASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 MESTP3-201ENST00000503460 968 ntBASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.17■□□□□ 0.02
RAI2Q9Y5P3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms