Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTDP1Q9Y5B0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 NKAIN1P1-201ENST00000435754 582 ntBASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 TUBB8P8-201ENST00000458717 1058 ntBASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTDP1Q9Y5B0 AC023024.2-201ENST00000623561 1993 ntBASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 C18orf15-201ENST00000623680 2534 ntBASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 RNMTL1P1-201ENST00000454103 560 ntBASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 HIST2H2BC-201ENST00000498492 580 ntBASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 AL358472.3-201ENST00000608147 415 ntBASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 AC091544.8-201ENST00000619490 361 ntBASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 AC011840.2-201ENST00000563063 1520 ntBASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 TMBIM7P-203ENST00000641617 1718 ntBASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTDP1Q9Y5B0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTDP1Q9Y5B0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms