Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 KRT19P2-202ENST00000557173 1012 ntBASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 FAM90A12P-201ENST00000519497 2375 ntBASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 FAM90A24P-201ENST00000520792 2369 ntBASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TPRKBQ9Y3C4 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 SLED1-202ENST00000512051 380 ntBASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 FAM215A-202ENST00000632077 792 ntBASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 AC114271.1-201ENST00000612689 2813 ntBASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 AC012617.1-204ENST00000586340 2305 ntBASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TPRKBQ9Y3C4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 AC098831.1-202ENST00000438821 336 ntBASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.72□□□□□ -0.21
TPRKBQ9Y3C4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms