Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.58■□□□□ 0.08
AP4E1Q9UPM8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 POM121L8P-201ENST00000417732 1281 ntBASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 NME2P1-201ENST00000426182 414 ntBASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 POM121L9P-203ENST00000441984 1285 ntBASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 BCRP2-202ENST00000447763 634 ntBASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 BCRP6-201ENST00000510112 632 ntBASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 BCRP7-201ENST00000511549 544 ntBASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 RN7SL48P-201ENST00000579283 293 ntBASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 AC233724.13-201ENST00000598383 410 ntBASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP4E1Q9UPM8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 AC015656.1-201ENST00000624209 3578 ntBASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 TLE1P1-201ENST00000422965 589 ntBASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 AC025279.2-201ENST00000569730 653 ntBASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 LINC02084-201ENST00000606069 1096 ntBASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 AL022328.1-201ENST00000610050 478 ntBASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 CLUHP2-201ENST00000426660 1303 ntBASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4E1Q9UPM8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4E1Q9UPM8 AC005912.2-201ENST00000619492 2400 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms