Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.7■□□□□ 0.1
PPARGC1AQ9UBK2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 AL355864.2-201ENST00000447420 863 ntBASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 REXO1L2P-201ENST00000425429 2069 ntBASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PPARGC1AQ9UBK2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 GRK6P1-201ENST00000400595 1711 ntBASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 AL157414.3-201ENST00000624276 1954 ntBASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 LILRP1-201ENST00000444199 1370 ntBASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 AL022328.1-201ENST00000610050 478 ntBASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms