Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 AC016397.2-201ENST00000624848 1985 ntBASIC13.76□□□□□ -0.21
CLN6Q9NWW5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 HTR5BP-201ENST00000430851 1154 ntBASIC13.76□□□□□ -0.21
CLN6Q9NWW5 AC005237.2-201ENST00000434368 219 ntBASIC13.76□□□□□ -0.21
CLN6Q9NWW5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 SAMD11P1-201ENST00000571429 661 ntBASIC13.76□□□□□ -0.21
CLN6Q9NWW5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 TCAF1P1-201ENST00000414990 2232 ntBASIC13.76□□□□□ -0.21
CLN6Q9NWW5 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.76□□□□□ -0.21
CLN6Q9NWW5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.75□□□□□ -0.21
CLN6Q9NWW5 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 AGGF1P1-201ENST00000509500 2073 ntBASIC13.75□□□□□ -0.21
CLN6Q9NWW5 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 AC074338.1-201ENST00000416825 156 ntBASIC13.75□□□□□ -0.21
CLN6Q9NWW5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 AC004832.2-201ENST00000426397 482 ntBASIC13.75□□□□□ -0.21
CLN6Q9NWW5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 AL133215.2-201ENST00000609242 977 ntBASIC13.75□□□□□ -0.21
CLN6Q9NWW5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLN6Q9NWW5 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms