Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 AL121723.1-201ENST00000445194 1519 ntBASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 AC004840.1-201ENST00000636359 365 ntBASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 BEND3P1-201ENST00000421591 1944 ntBASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LIN7CQ9NUP9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 C8orf49-201ENST00000525043 1968 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 MEP1AP4-201ENST00000423244 1087 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 RPL13P2-201ENST00000440687 659 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 TPT1P11-201ENST00000458482 498 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 MIR4745-201ENST00000577608 62 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AC092364.2-202ENST00000597012 1073 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms