Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
IFT46Q9NQC8 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFT46Q9NQC8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.05□□□□□ -0.32
IFT46Q9NQC8 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFT46Q9NQC8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFT46Q9NQC8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFT46Q9NQC8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.05□□□□□ -0.32
IFT46Q9NQC8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.05□□□□□ -0.32
IFT46Q9NQC8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFT46Q9NQC8 AC083964.2-201ENST00000623988 2396 ntBASIC13.05□□□□□ -0.32
IFT46Q9NQC8 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 REXO1L4P-201ENST00000605109 1937 ntBASIC13.04□□□□□ -0.32
IFT46Q9NQC8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 AC004870.1-201ENST00000315132 882 ntBASIC13.04□□□□□ -0.32
IFT46Q9NQC8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 AC007967.2-201ENST00000432613 625 ntBASIC13.04□□□□□ -0.32
IFT46Q9NQC8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 AP000842.3-202ENST00000569238 1080 ntBASIC13.04□□□□□ -0.32
IFT46Q9NQC8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 AC015802.1-201ENST00000588104 1449 ntBASIC13.04□□□□□ -0.32
IFT46Q9NQC8 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.04□□□□□ -0.32
IFT46Q9NQC8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFT46Q9NQC8 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms