Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.61■□□□□ 0.25
VTA1Q9NP79 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 AC103691.2-201ENST00000618824 433 ntBASIC16.61■□□□□ 0.25
VTA1Q9NP79 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.61■□□□□ 0.25
VTA1Q9NP79 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VTA1Q9NP79 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 AC069218.1-201ENST00000435269 762 ntBASIC16.6■□□□□ 0.25
VTA1Q9NP79 XBP1P1-201ENST00000436573 652 ntBASIC16.6■□□□□ 0.25
VTA1Q9NP79 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 AC018635.2-201ENST00000608625 364 ntBASIC16.6■□□□□ 0.25
VTA1Q9NP79 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
VTA1Q9NP79 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTA1Q9NP79 FRMPD2B-201ENST00000431305 1347 ntBASIC16.6■□□□□ 0.25
VTA1Q9NP79 MRPL37P1-201ENST00000592451 1337 ntBASIC16.6■□□□□ 0.25
VTA1Q9NP79 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms