Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 AC026410.3-201ENST00000514280 936 ntBASIC14.87□□□□□ -0.03
SSU72Q9NP77 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 AL391069.4-201ENST00000609583 481 ntBASIC14.87□□□□□ -0.03
SSU72Q9NP77 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.87□□□□□ -0.03
SSU72Q9NP77 AL158212.4-201ENST00000624062 1286 ntBASIC14.87□□□□□ -0.03
SSU72Q9NP77 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 CICP20-201ENST00000443330 2801 ntBASIC14.87□□□□□ -0.03
SSU72Q9NP77 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SSU72Q9NP77 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSU72Q9NP77 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 HSPA8P5-201ENST00000456928 2069 ntBASIC14.86□□□□□ -0.03
SSU72Q9NP77 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 FDX1P1-201ENST00000449115 551 ntBASIC14.86□□□□□ -0.03
SSU72Q9NP77 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 TIMM17BP1-201ENST00000545713 516 ntBASIC14.86□□□□□ -0.03
SSU72Q9NP77 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 AL603764.1-201ENST00000636452 321 ntBASIC14.86□□□□□ -0.03
SSU72Q9NP77 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 FAM90A12P-201ENST00000519497 2375 ntBASIC14.86□□□□□ -0.03
SSU72Q9NP77 FAM90A24P-201ENST00000520792 2369 ntBASIC14.86□□□□□ -0.03
SSU72Q9NP77 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 AC020658.7-201ENST00000624274 2442 ntBASIC14.86□□□□□ -0.03
SSU72Q9NP77 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSU72Q9NP77 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.86□□□□□ -0.03
SSU72Q9NP77 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.85□□□□□ -0.03
SSU72Q9NP77 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.85□□□□□ -0.03
SSU72Q9NP77 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SSU72Q9NP77 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SSU72Q9NP77 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSU72Q9NP77 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms