Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 AL138725.1-201ENST00000407347 1314 ntBASIC14.34□□□□□ -0.11
BRF2Q9HAW0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 AC092135.3-201ENST00000624151 1846 ntBASIC14.34□□□□□ -0.11
BRF2Q9HAW0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.34□□□□□ -0.11
BRF2Q9HAW0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
BRF2Q9HAW0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 AC012441.1-201ENST00000446669 685 ntBASIC14.33□□□□□ -0.12
BRF2Q9HAW0 FO681548.1-201ENST00000455617 1132 ntBASIC14.33□□□□□ -0.12
BRF2Q9HAW0 AC131206.1-201ENST00000538078 1211 ntBASIC14.33□□□□□ -0.12
BRF2Q9HAW0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 SNX18-202ENST00000343017 3140 ntBASIC14.33□□□□□ -0.12
BRF2Q9HAW0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BRF2Q9HAW0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 BAATP1-201ENST00000412284 1225 ntBASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AC245100.3-201ENST00000441281 285 ntBASIC14.32□□□□□ -0.12
BRF2Q9HAW0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 PTP4A1P2-201ENST00000546033 454 ntBASIC14.32□□□□□ -0.12
BRF2Q9HAW0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AC138761.1-201ENST00000584393 385 ntBASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 AL355385.1-201ENST00000606123 409 ntBASIC14.32□□□□□ -0.12
BRF2Q9HAW0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BRF2Q9HAW0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms