Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
COL25A1Q9BXS0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 AL591122.2-201ENST00000624125 1853 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 AC084364.1-201ENST00000551967 1556 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 OR52M2P-201ENST00000414298 959 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 AL161727.1-201ENST00000457409 530 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 RN7SL794P-201ENST00000469816 280 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 CETN3-205ENST00000522842 664 ntTSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 FOS-205ENST00000555242 629 ntTSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 AL133467.4-201ENST00000602953 725 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 AL136982.5-201ENST00000605222 294 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 BX088702.1-201ENST00000610784 235 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 DUX4L33-201ENST00000635217 958 ntBASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.7□□□□□ -0.06
COL25A1Q9BXS0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 AL137783.1-201ENST00000623494 1896 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 TUBA3GP-201ENST00000410028 1325 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 AC011477.6-201ENST00000604980 1927 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 HLA-DQB3-203ENST00000425319 356 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 AC074019.1-201ENST00000428788 1096 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 ALG10-202ENST00000538927 571 ntTSL 5 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 AP003170.2-201ENST00000544730 786 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 PMM2-216ENST00000569958 698 ntTSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 AP005264.5-201ENST00000590066 467 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.69□□□□□ -0.06
COL25A1Q9BXS0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms