Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 MIR6074-201ENST00000612054 107 ntBASIC9.98□□□□□ -0.81
LITAFQ99732 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 AC073869.1-201ENST00000415574 2762 ntBASIC9.98□□□□□ -0.81
LITAFQ99732 TP73-209ENST00000603362 1668 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 AC131902.2-201ENST00000566892 2172 ntBASIC9.98□□□□□ -0.81
LITAFQ99732 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 STK25-235ENST00000543554 2556 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC9.98□□□□□ -0.81
LITAFQ99732 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LITAFQ99732 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LITAFQ99732 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC9.98□□□□□ -0.81
LITAFQ99732 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 DLX4-206ENST00000611342 1662 ntBASIC9.97□□□□□ -0.81
LITAFQ99732 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
LITAFQ99732 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
LITAFQ99732 TMPOP1-202ENST00000424642 1267 ntBASIC9.97□□□□□ -0.81
LITAFQ99732 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC9.97□□□□□ -0.81
LITAFQ99732 AC091304.2-201ENST00000564639 760 ntBASIC9.97□□□□□ -0.81
LITAFQ99732 INO80E-210ENST00000567705 880 ntTSL 3 BASIC9.97□□□□□ -0.81
LITAFQ99732 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 AGAP12P-201ENST00000585227 2359 ntBASIC9.97□□□□□ -0.81
LITAFQ99732 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC9.97□□□□□ -0.81
LITAFQ99732 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 KRT8P35-201ENST00000483942 1338 ntBASIC9.97□□□□□ -0.81
LITAFQ99732 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LITAFQ99732 RHPN1-AS1-201ENST00000518049 1918 ntBASIC9.97□□□□□ -0.81
LITAFQ99732 STK3-218ENST00000617590 2485 ntTSL 5 BASIC9.97□□□□□ -0.81
LITAFQ99732 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms