Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.6□□□□□ -0.39
CCL13Q99616 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
CCL13Q99616 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CCL13Q99616 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL13Q99616 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL13Q99616 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
CCL13Q99616 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL13Q99616 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
CCL13Q99616 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL13Q99616 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL13Q99616 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL13Q99616 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 FAM197Y7-201ENST00000432892 766 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL13Q99616 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL13Q99616 AC245100.3-201ENST00000441281 285 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CCL13Q99616 AL590640.2-201ENST00000457038 527 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 GPR53P-205ENST00000457298 1084 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL13Q99616 HILS1-202ENST00000545329 423 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 AC106886.1-201ENST00000568660 600 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 RN7SL48P-201ENST00000579283 293 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 ECM1P1-201ENST00000604092 1279 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
CCL13Q99616 AC132938.4-201ENST00000623835 848 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL13Q99616 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CCL13Q99616 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCL13Q99616 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL13Q99616 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CCL13Q99616 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCL13Q99616 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL13Q99616 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CCL13Q99616 FGD5P1-202ENST00000614866 2498 ntBASIC12.59□□□□□ -0.39
CCL13Q99616 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL13Q99616 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCL13Q99616 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.39
CCL13Q99616 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCL13Q99616 PDIA3P1-201ENST00000471856 1510 ntBASIC12.58□□□□□ -0.4
CCL13Q99616 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CCL13Q99616 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CCL13Q99616 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCL13Q99616 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
CCL13Q99616 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL13Q99616 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CCL13Q99616 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms