Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF2Q99496 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.06□□□□□ -0.48
RNF2Q99496 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RNF2Q99496 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF2Q99496 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RNF2Q99496 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.06□□□□□ -0.48
RNF2Q99496 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RNF2Q99496 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.06□□□□□ -0.48
RNF2Q99496 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.05□□□□□ -0.48
RNF2Q99496 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 AC131212.3-201ENST00000624087 4219 ntBASIC12.05□□□□□ -0.48
RNF2Q99496 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
RNF2Q99496 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
RNF2Q99496 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
RNF2Q99496 FO393414.2-201ENST00000405153 598 ntBASIC12.05□□□□□ -0.48
RNF2Q99496 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.05□□□□□ -0.48
RNF2Q99496 RPL37AP1-201ENST00000412502 279 ntBASIC12.05□□□□□ -0.48
RNF2Q99496 AL080243.2-201ENST00000418783 582 ntBASIC12.05□□□□□ -0.48
RNF2Q99496 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 HLA-V-204ENST00000476601 1289 ntBASIC12.05□□□□□ -0.48
RNF2Q99496 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 AL138828.2-201ENST00000615812 383 ntBASIC12.05□□□□□ -0.48
RNF2Q99496 AC073592.8-201ENST00000624126 511 ntBASIC12.05□□□□□ -0.48
RNF2Q99496 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 AC136759.1-202ENST00000530858 2194 ntBASIC12.05□□□□□ -0.48
RNF2Q99496 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF2Q99496 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RNF2Q99496 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
RNF2Q99496 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF2Q99496 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RNF2Q99496 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
RNF2Q99496 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RNF2Q99496 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF2Q99496 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
RNF2Q99496 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF2Q99496 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RNF2Q99496 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF2Q99496 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF2Q99496 SERBP1P3-201ENST00000459980 809 ntBASIC12.04□□□□□ -0.48
RNF2Q99496 AC092183.1-201ENST00000469884 875 ntBASIC12.04□□□□□ -0.48
RNF2Q99496 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms