Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.11■□□□□ 0.01
NOTCH4Q99466 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.11■□□□□ 0.01
NOTCH4Q99466 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 AC097065.1-201ENST00000425737 517 ntBASIC15.1■□□□□ 0.01
NOTCH4Q99466 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 KRT8P1-201ENST00000557533 1207 ntBASIC15.1■□□□□ 0.01
NOTCH4Q99466 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 AC103810.10-201ENST00000606504 343 ntBASIC15.1■□□□□ 0.01
NOTCH4Q99466 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 AL512306.1-201ENST00000432698 848 ntBASIC15.1■□□□□ 0.01
NOTCH4Q99466 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 CR383656.3-201ENST00000551315 183 ntBASIC15.1■□□□□ 0.01
NOTCH4Q99466 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NOTCH4Q99466 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
NOTCH4Q99466 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 AC079112.1-201ENST00000454972 939 ntBASIC15.09■□□□□ 0.01
NOTCH4Q99466 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 AC093752.3-201ENST00000567343 901 ntBASIC15.09■□□□□ 0.01
NOTCH4Q99466 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 MIR6858-201ENST00000620733 67 ntBASIC15.09■□□□□ 0.01
NOTCH4Q99466 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NOTCH4Q99466 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
NOTCH4Q99466 AC090502.4-201ENST00000551714 1386 ntBASIC15.09■□□□□ 0.01
NOTCH4Q99466 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms