Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC11.01□□□□□ -0.65
MUC4Q99102 AC092552.1-201ENST00000547243 906 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.01□□□□□ -0.65
MUC4Q99102 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
MUC4Q99102 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC11.01□□□□□ -0.65
MUC4Q99102 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.01□□□□□ -0.65
MUC4Q99102 AC068587.10-201ENST00000641210 219 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.01□□□□□ -0.65
MUC4Q99102 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 NORAD-201ENST00000565493 5339 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
MUC4Q99102 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 AL391825.1-201ENST00000457671 1364 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 AL133338.1-201ENST00000565695 1517 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.01□□□□□ -0.65
MUC4Q99102 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
MUC4Q99102 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.01□□□□□ -0.65
MUC4Q99102 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.01□□□□□ -0.65
MUC4Q99102 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.01□□□□□ -0.65
MUC4Q99102 AC135586.1-201ENST00000539323 574 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.01□□□□□ -0.65
MUC4Q99102 AC036164.1-201ENST00000570544 333 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC11.01□□□□□ -0.65
MUC4Q99102 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.01□□□□□ -0.65
MUC4Q99102 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.01□□□□□ -0.65
MUC4Q99102 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 AL158070.2-201ENST00000623713 1621 ntBASIC11.01□□□□□ -0.65
MUC4Q99102 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.01□□□□□ -0.65
MUC4Q99102 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MUC4Q99102 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
MUC4Q99102 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11□□□□□ -0.65
MUC4Q99102 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 SPDYE19P-201ENST00000338590 713 ntBASIC11□□□□□ -0.65
MUC4Q99102 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11□□□□□ -0.65
MUC4Q99102 ELK2AP-201ENST00000392510 1007 ntBASIC11□□□□□ -0.65
MUC4Q99102 DGCR5-201ENST00000399539 862 ntBASIC11□□□□□ -0.65
MUC4Q99102 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11□□□□□ -0.65
MUC4Q99102 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
MUC4Q99102 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11□□□□□ -0.65
MUC4Q99102 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms