Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD1Q96PZ7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 RNA5SP417-201ENST00000516459 108 ntBASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 MIR6746-201ENST00000620971 63 ntBASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD1Q96PZ7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 FAM197Y6-201ENST00000420524 766 ntBASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 RPL3P5-201ENST00000441645 1232 ntBASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 SOD2-205ENST00000444946 917 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 RBPMSLP-201ENST00000433427 502 ntBASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.45□□□□□ -0.42
CSMD1Q96PZ7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 REXO1L4P-201ENST00000605109 1937 ntBASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.44□□□□□ -0.42
CSMD1Q96PZ7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms