Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ELK1P1-201ENST00000485699 580 ntBASIC14.25□□□□□ -0.13
COL21A1Q96P44 AC026410.3-201ENST00000514280 936 ntBASIC14.25□□□□□ -0.13
COL21A1Q96P44 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 INTS4P2-202ENST00000614726 2019 ntBASIC14.25□□□□□ -0.13
COL21A1Q96P44 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.25□□□□□ -0.13
COL21A1Q96P44 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL21A1Q96P44 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.25□□□□□ -0.13
COL21A1Q96P44 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 DRD5P1-201ENST00000456605 1438 ntBASIC14.24□□□□□ -0.13
COL21A1Q96P44 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 AC120045.2-201ENST00000567334 178 ntBASIC14.24□□□□□ -0.13
COL21A1Q96P44 SAMD11P1-201ENST00000571429 661 ntBASIC14.24□□□□□ -0.13
COL21A1Q96P44 CTBP2P3-201ENST00000585629 1255 ntBASIC14.24□□□□□ -0.13
COL21A1Q96P44 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 AC133539.2-201ENST00000604757 467 ntBASIC14.24□□□□□ -0.13
COL21A1Q96P44 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 AC007787.1-201ENST00000588095 1583 ntBASIC14.24□□□□□ -0.13
COL21A1Q96P44 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL21A1Q96P44 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.24□□□□□ -0.13
COL21A1Q96P44 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 AC136759.1-202ENST00000530858 2194 ntBASIC14.23□□□□□ -0.13
COL21A1Q96P44 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms