Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 AC015656.1-201ENST00000624209 3578 ntBASIC13.19□□□□□ -0.3
SPTSSAQ969W0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 AL162726.2-201ENST00000438986 1017 ntBASIC13.19□□□□□ -0.3
SPTSSAQ969W0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 LINC02560-201ENST00000596379 459 ntBASIC13.19□□□□□ -0.3
SPTSSAQ969W0 AL096865.1-201ENST00000606796 927 ntBASIC13.19□□□□□ -0.3
SPTSSAQ969W0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 AP005019.2-201ENST00000615104 511 ntBASIC13.19□□□□□ -0.3
SPTSSAQ969W0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSAQ969W0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 AC113367.3-201ENST00000508316 1912 ntBASIC13.18□□□□□ -0.3
SPTSSAQ969W0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 KLF2P2-201ENST00000416807 1039 ntBASIC13.18□□□□□ -0.3
SPTSSAQ969W0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 AC023090.2-201ENST00000625182 2110 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms