Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 AKAP8P1-201ENST00000434743 1349 ntBASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
MBD3L1Q8WWY6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AC072061.1-201ENST00000569710 2234 ntBASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AC215219.1-201ENST00000400706 1817 ntBASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AP002761.4-201ENST00000565433 3361 ntBASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 SLED1-202ENST00000512051 380 ntBASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 MIR6074-201ENST00000612054 107 ntBASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MBD3L1Q8WWY6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms