Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1BQ8WW43 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1BQ8WW43 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1BQ8WW43 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.58□□□□□ -0.24
APH1BQ8WW43 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1BQ8WW43 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1BQ8WW43 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 MED15P5-201ENST00000423150 992 ntBASIC13.57□□□□□ -0.24
APH1BQ8WW43 GPS2P2-201ENST00000430745 888 ntBASIC13.57□□□□□ -0.24
APH1BQ8WW43 ACTG1P14-201ENST00000446382 1122 ntBASIC13.57□□□□□ -0.24
APH1BQ8WW43 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 AC011840.2-201ENST00000563063 1520 ntBASIC13.57□□□□□ -0.24
APH1BQ8WW43 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 IL9RP2-201ENST00000423948 1312 ntBASIC13.57□□□□□ -0.24
APH1BQ8WW43 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
APH1BQ8WW43 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1BQ8WW43 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 AC011498.7-201ENST00000624986 2027 ntBASIC13.56□□□□□ -0.24
APH1BQ8WW43 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 HSPA8P5-201ENST00000456928 2069 ntBASIC13.56□□□□□ -0.24
APH1BQ8WW43 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 SPDYE14P-201ENST00000442619 822 ntBASIC13.56□□□□□ -0.24
APH1BQ8WW43 GAPDHP40-201ENST00000505218 1006 ntBASIC13.56□□□□□ -0.24
APH1BQ8WW43 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1BQ8WW43 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 AC072061.1-201ENST00000569710 2234 ntBASIC13.56□□□□□ -0.24
APH1BQ8WW43 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1BQ8WW43 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.55□□□□□ -0.24
APH1BQ8WW43 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms