Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 KRT18P43-201ENST00000469825 1281 ntBASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 FAM86C2P-203ENST00000528684 1004 ntBASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 AL049840.3-201ENST00000602669 611 ntBASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 CLK3P2-201ENST00000427566 1453 ntBASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 AL671277.1-201ENST00000429656 993 ntBASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 KRT18P64-201ENST00000434946 1219 ntBASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 RARRES2P9-201ENST00000565168 469 ntBASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
SMIM4Q8WVI0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms