Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 VDAC1P1-201ENST00000439229 848 ntBASIC13.4□□□□□ -0.26
RNF138Q8WVD3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 AC092658.1-201ENST00000505836 891 ntBASIC13.4□□□□□ -0.26
RNF138Q8WVD3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 AC091271.1-201ENST00000611877 1162 ntBASIC13.4□□□□□ -0.26
RNF138Q8WVD3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.4□□□□□ -0.26
RNF138Q8WVD3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 AC106881.1-201ENST00000605849 3329 ntBASIC13.4□□□□□ -0.26
RNF138Q8WVD3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RNF138Q8WVD3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.4□□□□□ -0.27
RNF138Q8WVD3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 FAM86MP-201ENST00000340703 885 ntBASIC13.39□□□□□ -0.27
RNF138Q8WVD3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.39□□□□□ -0.27
RNF138Q8WVD3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 AC004898.1-201ENST00000451057 766 ntBASIC13.39□□□□□ -0.27
RNF138Q8WVD3 PFN1P12-201ENST00000455938 534 ntBASIC13.39□□□□□ -0.27
RNF138Q8WVD3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 AC126915.1-201ENST00000522847 1038 ntBASIC13.39□□□□□ -0.27
RNF138Q8WVD3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 AL160314.3-201ENST00000556041 767 ntBASIC13.39□□□□□ -0.27
RNF138Q8WVD3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.39□□□□□ -0.27
RNF138Q8WVD3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF138Q8WVD3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 DPM3-202ENST00000368399 517 ntBASIC13.38□□□□□ -0.27
RNF138Q8WVD3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 AC006033.1-201ENST00000440505 426 ntBASIC13.38□□□□□ -0.27
RNF138Q8WVD3 HLA-J-204ENST00000495278 958 ntBASIC13.38□□□□□ -0.27
RNF138Q8WVD3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RNF138Q8WVD3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.38□□□□□ -0.27
RNF138Q8WVD3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms