Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CICP11-201ENST00000434745 2827 ntBASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.07□□□□□ -0.32
CCDC107Q8WV48 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.07□□□□□ -0.32
CCDC107Q8WV48 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 TARDBPP1-201ENST00000442013 1203 ntBASIC13.07□□□□□ -0.32
CCDC107Q8WV48 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 CETN4P-206ENST00000642099 2168 ntBASIC13.07□□□□□ -0.32
CCDC107Q8WV48 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC107Q8WV48 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC107Q8WV48 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms