Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 AC005740.1-201ENST00000515639 522 ntBASIC20.55■□□□□ 0.88
UBR1Q8IWV7 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 RPS18P9-201ENST00000482817 460 ntBASIC20.54■□□□□ 0.88
UBR1Q8IWV7 IGHEP1-201ENST00000521393 651 ntBASIC20.54■□□□□ 0.88
UBR1Q8IWV7 DLK1-205ENST00000556051 469 ntTSL 2 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 AL365181.1-201ENST00000564032 1828 ntBASIC20.54■□□□□ 0.88
UBR1Q8IWV7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBR1Q8IWV7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 KNOP1P1-201ENST00000542108 989 ntBASIC20.53■□□□□ 0.88
UBR1Q8IWV7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 AC004686.1-201ENST00000605113 538 ntBASIC20.53■□□□□ 0.88
UBR1Q8IWV7 HPX-213ENST00000615166 826 ntTSL 5 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 AL365203.3-201ENST00000609742 2057 ntBASIC20.53■□□□□ 0.88
UBR1Q8IWV7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 TMBIM7P-203ENST00000641617 1718 ntBASIC20.53■□□□□ 0.88
UBR1Q8IWV7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 AC006987.1-201ENST00000413610 527 ntBASIC20.53■□□□□ 0.88
UBR1Q8IWV7 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 AC092896.1-201ENST00000465850 380 ntBASIC20.53■□□□□ 0.88
UBR1Q8IWV7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 AC090136.2-201ENST00000517809 420 ntBASIC20.53■□□□□ 0.88
UBR1Q8IWV7 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 GAS7-216ENST00000583882 553 ntTSL 5 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBR1Q8IWV7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 HNRNPA1P2-207ENST00000432375 960 ntBASIC20.52■□□□□ 0.88
UBR1Q8IWV7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC20.52■□□□□ 0.88
UBR1Q8IWV7 RN7SL288P-201ENST00000490496 291 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms