Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 AL592076.1-201ENST00000424448 303 ntBASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 RN7SL8P-201ENST00000461771 266 ntBASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 AL031713.1-201ENST00000564813 661 ntBASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 AC087045.2-201ENST00000606279 1003 ntBASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 AC018629.1-201ENST00000623381 1736 ntBASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 AC068587.6-202ENST00000641839 5619 ntBASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 AC136621.1-201ENST00000624017 2304 ntBASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 TSPY25P-201ENST00000429463 745 ntBASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 AC092299.1-201ENST00000632679 757 ntBASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 LINC01165-201ENST00000445190 1623 ntBASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPAS4Q8IUM7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 AC008894.3-201ENST00000624324 3103 ntBASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPAS4Q8IUM7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms