Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC138761.1-201ENST00000584393 385 ntBASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AP005019.2-201ENST00000615104 511 ntBASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AC018442.1-201ENST00000421439 2061 ntBASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AC023090.2-201ENST00000625182 2110 ntBASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 KLF2P2-201ENST00000416807 1039 ntBASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 AC093433.1-201ENST00000458048 571 ntBASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 AC092364.2-202ENST00000597012 1073 ntBASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 SBF1P1-201ENST00000444527 5631 ntBASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 AC005252.3-201ENST00000623855 2258 ntBASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC1Q6VVB1 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NHLRC1Q6VVB1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 EIF3FP3-201ENST00000434851 1086 ntBASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 AC022137.2-201ENST00000503482 481 ntBASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.52□□□□□ -0.25
NHLRC1Q6VVB1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms