Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 MYO15B-237ENST00000642007 4893 ntBASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 AL512384.1-201ENST00000406683 331 ntBASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 GAPDHP21-201ENST00000450301 1010 ntBASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 AL035252.4-201ENST00000624174 288 ntBASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 MSTO2P-201ENST00000314835 1709 ntBASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 AC005034.1-201ENST00000426657 489 ntBASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 AC010319.3-201ENST00000597028 470 ntBASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.24■□□□□ 0.03
KHDC1Q4VXA5 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AC089987.1-201ENST00000551654 2209 ntBASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AC099521.3-201ENST00000624251 2938 ntBASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms