Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 AC254562.1-201ENST00000417586 456 ntBASIC13.37□□□□□ -0.27
ODF4Q2M2E3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 HLA-V-204ENST00000476601 1289 ntBASIC13.37□□□□□ -0.27
ODF4Q2M2E3 AC125807.1-201ENST00000483097 614 ntBASIC13.37□□□□□ -0.27
ODF4Q2M2E3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 AC134684.3-201ENST00000641758 218 ntBASIC13.37□□□□□ -0.27
ODF4Q2M2E3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.37□□□□□ -0.27
ODF4Q2M2E3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ODF4Q2M2E3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 AC027369.6-201ENST00000525520 931 ntBASIC13.36□□□□□ -0.27
ODF4Q2M2E3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.36□□□□□ -0.27
ODF4Q2M2E3 AL512356.2-201ENST00000546955 174 ntBASIC13.36□□□□□ -0.27
ODF4Q2M2E3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms