Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL353726.2-201ENST00000623259 884 ntBASIC13.18□□□□□ -0.3
TFF3Q07654 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.18□□□□□ -0.3
TFF3Q07654 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.18□□□□□ -0.3
TFF3Q07654 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TFF3Q07654 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.18□□□□□ -0.3
TFF3Q07654 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.18□□□□□ -0.3
TFF3Q07654 AC126755.1-201ENST00000525846 6405 ntBASIC13.18□□□□□ -0.3
TFF3Q07654 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TFF3Q07654 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
TFF3Q07654 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TFF3Q07654 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TFF3Q07654 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.17□□□□□ -0.3
TFF3Q07654 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.17□□□□□ -0.3
TFF3Q07654 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.17□□□□□ -0.3
TFF3Q07654 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.17□□□□□ -0.3
TFF3Q07654 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.17□□□□□ -0.3
TFF3Q07654 RPL5P21-201ENST00000404620 815 ntBASIC13.17□□□□□ -0.3
TFF3Q07654 RN7SKP175-201ENST00000408472 289 ntBASIC13.17□□□□□ -0.3
TFF3Q07654 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.17□□□□□ -0.3
TFF3Q07654 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.17□□□□□ -0.3
TFF3Q07654 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.17□□□□□ -0.3
TFF3Q07654 AL596276.2-201ENST00000447525 331 ntBASIC13.17□□□□□ -0.3
TFF3Q07654 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TFF3Q07654 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.17□□□□□ -0.3
TFF3Q07654 AC125604.1-201ENST00000496255 707 ntBASIC13.17□□□□□ -0.3
TFF3Q07654 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
TFF3Q07654 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.17□□□□□ -0.3
TFF3Q07654 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.17□□□□□ -0.3
TFF3Q07654 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.17□□□□□ -0.3
TFF3Q07654 AC018635.2-201ENST00000608625 364 ntBASIC13.17□□□□□ -0.3
TFF3Q07654 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.17□□□□□ -0.3
TFF3Q07654 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.17□□□□□ -0.3
TFF3Q07654 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.17□□□□□ -0.3
TFF3Q07654 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TFF3Q07654 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.17□□□□□ -0.3
TFF3Q07654 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 AC067930.6-201ENST00000623257 4947 ntBASIC13.17□□□□□ -0.3
TFF3Q07654 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TFF3Q07654 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TFF3Q07654 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TFF3Q07654 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.17□□□□□ -0.3
TFF3Q07654 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TFF3Q07654 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TFF3Q07654 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
TFF3Q07654 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
TFF3Q07654 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.16□□□□□ -0.3
TFF3Q07654 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.16□□□□□ -0.3
TFF3Q07654 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.16□□□□□ -0.3
TFF3Q07654 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.16□□□□□ -0.3
TFF3Q07654 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
TFF3Q07654 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
TFF3Q07654 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.16□□□□□ -0.3
TFF3Q07654 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 AC006335.1-201ENST00000445200 547 ntBASIC13.16□□□□□ -0.3
TFF3Q07654 PUDPP3-201ENST00000445368 636 ntBASIC13.16□□□□□ -0.3
TFF3Q07654 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TFF3Q07654 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TFF3Q07654 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.16□□□□□ -0.3
TFF3Q07654 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms