Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 BAATP1-201ENST00000412284 1225 ntBASIC13.12□□□□□ -0.31
HIST1H3AP68431 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 HMGN1P19-201ENST00000436976 333 ntBASIC13.12□□□□□ -0.31
HIST1H3AP68431 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 AC092364.2-202ENST00000597012 1073 ntBASIC13.12□□□□□ -0.31
HIST1H3AP68431 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 AP001267.2-201ENST00000532619 2086 ntBASIC13.12□□□□□ -0.31
HIST1H3AP68431 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 MSTO2P-201ENST00000314835 1709 ntBASIC13.11□□□□□ -0.31
HIST1H3AP68431 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 FO681548.1-201ENST00000455617 1132 ntBASIC13.11□□□□□ -0.31
HIST1H3AP68431 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 MIR5189-201ENST00000577370 114 ntBASIC13.11□□□□□ -0.31
HIST1H3AP68431 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 SALL4P5-201ENST00000419001 1760 ntBASIC13.11□□□□□ -0.31
HIST1H3AP68431 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 AL138709.1-201ENST00000614840 1693 ntBASIC13.11□□□□□ -0.31
HIST1H3AP68431 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 AC134312.5-201ENST00000568031 1313 ntBASIC13.11□□□□□ -0.31
HIST1H3AP68431 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H3AP68431 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H3AP68431 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H3AP68431 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H3AP68431 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms