Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.28□□□□□ -0.12
SKP1P63208 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SKP1P63208 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.28□□□□□ -0.12
SKP1P63208 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.28□□□□□ -0.12
SKP1P63208 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.28□□□□□ -0.12
SKP1P63208 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SKP1P63208 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SKP1P63208 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.28□□□□□ -0.12
SKP1P63208 AL136379.1-201ENST00000623471 2642 ntBASIC14.28□□□□□ -0.12
SKP1P63208 AC006453.4-201ENST00000636949 1252 ntBASIC14.28□□□□□ -0.12
SKP1P63208 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SKP1P63208 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SKP1P63208 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SKP1P63208 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SKP1P63208 TCAF2P1-201ENST00000291129 2421 ntBASIC14.27□□□□□ -0.12
SKP1P63208 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SKP1P63208 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.27□□□□□ -0.12
SKP1P63208 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SKP1P63208 ACE3P-201ENST00000423435 1973 ntBASIC14.27□□□□□ -0.12
SKP1P63208 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.27□□□□□ -0.12
SKP1P63208 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
SKP1P63208 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.27□□□□□ -0.12
SKP1P63208 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
SKP1P63208 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.27□□□□□ -0.12
SKP1P63208 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SKP1P63208 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SKP1P63208 AHCYP2-201ENST00000430630 1300 ntBASIC14.27□□□□□ -0.12
SKP1P63208 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.27□□□□□ -0.13
SKP1P63208 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.27□□□□□ -0.13
SKP1P63208 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
SKP1P63208 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.27□□□□□ -0.13
SKP1P63208 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SKP1P63208 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.27□□□□□ -0.13
SKP1P63208 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.27□□□□□ -0.13
SKP1P63208 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.27□□□□□ -0.13
SKP1P63208 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.27□□□□□ -0.13
SKP1P63208 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.27□□□□□ -0.13
SKP1P63208 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.27□□□□□ -0.13
SKP1P63208 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.27□□□□□ -0.13
SKP1P63208 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.27□□□□□ -0.13
SKP1P63208 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.27□□□□□ -0.13
SKP1P63208 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.27□□□□□ -0.13
SKP1P63208 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.27□□□□□ -0.13
SKP1P63208 AL359258.3-201ENST00000622910 2331 ntBASIC14.27□□□□□ -0.13
SKP1P63208 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.27□□□□□ -0.13
SKP1P63208 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SKP1P63208 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.27□□□□□ -0.13
SKP1P63208 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SKP1P63208 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SKP1P63208 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.27□□□□□ -0.13
SKP1P63208 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SKP1P63208 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.26□□□□□ -0.13
SKP1P63208 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.26□□□□□ -0.13
SKP1P63208 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.26□□□□□ -0.13
SKP1P63208 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.26□□□□□ -0.13
SKP1P63208 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.26□□□□□ -0.13
SKP1P63208 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SKP1P63208 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms