Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.82■□□□□ 0.12
USP46P62068 AC007969.1-201ENST00000433675 447 ntBASIC15.82■□□□□ 0.12
USP46P62068 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.82■□□□□ 0.12
USP46P62068 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 ZNF767P-206ENST00000513792 565 ntBASIC15.82■□□□□ 0.12
USP46P62068 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.82■□□□□ 0.12
USP46P62068 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC15.82■□□□□ 0.12
USP46P62068 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
USP46P62068 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.82■□□□□ 0.12
USP46P62068 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.82■□□□□ 0.12
USP46P62068 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.82■□□□□ 0.12
USP46P62068 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.82■□□□□ 0.12
USP46P62068 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.82■□□□□ 0.12
USP46P62068 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.82■□□□□ 0.12
USP46P62068 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
USP46P62068 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
USP46P62068 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.82■□□□□ 0.12
USP46P62068 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
USP46P62068 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.81■□□□□ 0.12
USP46P62068 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
USP46P62068 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
USP46P62068 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
USP46P62068 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.81■□□□□ 0.12
USP46P62068 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 MTX1P1-201ENST00000440904 838 ntBASIC15.81■□□□□ 0.12
USP46P62068 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 AL591846.1-201ENST00000451736 433 ntBASIC15.81■□□□□ 0.12
USP46P62068 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 FTLP10-202ENST00000505798 471 ntBASIC15.81■□□□□ 0.12
USP46P62068 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.81■□□□□ 0.12
USP46P62068 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.81■□□□□ 0.12
USP46P62068 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.81■□□□□ 0.12
USP46P62068 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.81■□□□□ 0.12
USP46P62068 AL109954.1-202ENST00000564051 2148 ntBASIC15.81■□□□□ 0.12
USP46P62068 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 AC005695.3-201ENST00000614522 232 ntBASIC15.81■□□□□ 0.12
USP46P62068 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.81■□□□□ 0.12
USP46P62068 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP46P62068 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.81■□□□□ 0.12
USP46P62068 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.8■□□□□ 0.12
USP46P62068 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
USP46P62068 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
USP46P62068 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.8■□□□□ 0.12
USP46P62068 AC015818.8-201ENST00000587907 1519 ntBASIC15.8■□□□□ 0.12
USP46P62068 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.8■□□□□ 0.12
USP46P62068 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
USP46P62068 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 FKBP4P6-201ENST00000457486 1332 ntBASIC15.8■□□□□ 0.12
USP46P62068 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
USP46P62068 BTBD6P1-201ENST00000412176 1267 ntBASIC15.8■□□□□ 0.12
USP46P62068 AL691447.1-201ENST00000419456 387 ntBASIC15.8■□□□□ 0.12
USP46P62068 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
USP46P62068 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.8■□□□□ 0.12
USP46P62068 PFN1P12-201ENST00000455938 534 ntBASIC15.8■□□□□ 0.12
USP46P62068 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP46P62068 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms