Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.12□□□□□ -0.31
CLDN12P56749 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 LINC00628-201ENST00000628516 1289 ntBASIC13.12□□□□□ -0.31
CLDN12P56749 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 DGCR9-201ENST00000609630 2415 ntBASIC13.12□□□□□ -0.31
CLDN12P56749 AC016397.2-201ENST00000624848 1985 ntBASIC13.12□□□□□ -0.31
CLDN12P56749 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 AL031595.1-201ENST00000623969 4709 ntBASIC13.12□□□□□ -0.31
CLDN12P56749 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLDN12P56749 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN12P56749 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN12P56749 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLDN12P56749 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLDN12P56749 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN12P56749 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.11□□□□□ -0.31
CLDN12P56749 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDN12P56749 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLDN12P56749 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLDN12P56749 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CLDN12P56749 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDN12P56749 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CLDN12P56749 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLDN12P56749 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CLDN12P56749 AC015922.1-201ENST00000421102 1152 ntBASIC13.11□□□□□ -0.31
CLDN12P56749 ACTG1P14-201ENST00000446382 1122 ntBASIC13.11□□□□□ -0.31
CLDN12P56749 KRT18P43-201ENST00000469825 1281 ntBASIC13.11□□□□□ -0.31
CLDN12P56749 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.11□□□□□ -0.31
CLDN12P56749 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDN12P56749 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN12P56749 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLDN12P56749 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN12P56749 AL079307.3-201ENST00000556114 283 ntBASIC13.11□□□□□ -0.31
CLDN12P56749 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN12P56749 AC025048.3-201ENST00000590609 569 ntBASIC13.11□□□□□ -0.31
CLDN12P56749 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN12P56749 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDN12P56749 AC005702.4-201ENST00000618393 416 ntBASIC13.11□□□□□ -0.31
CLDN12P56749 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
CLDN12P56749 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN12P56749 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN12P56749 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDN12P56749 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN12P56749 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN12P56749 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 AL360270.3-201ENST00000609118 1348 ntBASIC13.11□□□□□ -0.31
CLDN12P56749 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN12P56749 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDN12P56749 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN12P56749 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN12P56749 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms