Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 FAM197Y7-201ENST00000432892 766 ntBASIC11.17□□□□□ -0.62
CMC4P56277 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.17□□□□□ -0.62
CMC4P56277 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.17□□□□□ -0.62
CMC4P56277 KRT223P-202ENST00000449164 1292 ntBASIC11.17□□□□□ -0.62
CMC4P56277 AL035414.1-201ENST00000451327 857 ntBASIC11.17□□□□□ -0.62
CMC4P56277 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC11.17□□□□□ -0.62
CMC4P56277 ALG3P1-201ENST00000508806 1114 ntBASIC11.17□□□□□ -0.62
CMC4P56277 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.17□□□□□ -0.62
CMC4P56277 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.17□□□□□ -0.62
CMC4P56277 RN7SL713P-201ENST00000582127 302 ntBASIC11.17□□□□□ -0.62
CMC4P56277 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.17□□□□□ -0.62
CMC4P56277 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 AP000593.2-201ENST00000542775 1433 ntBASIC11.17□□□□□ -0.62
CMC4P56277 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.17□□□□□ -0.62
CMC4P56277 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
CMC4P56277 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CMC4P56277 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 ACE3P-201ENST00000423435 1973 ntBASIC11.16□□□□□ -0.62
CMC4P56277 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.16□□□□□ -0.62
CMC4P56277 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 APOC3-202ENST00000375345 604 ntTSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 AL136309.1-201ENST00000403917 691 ntBASIC11.16□□□□□ -0.62
CMC4P56277 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC11.16□□□□□ -0.62
CMC4P56277 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.16□□□□□ -0.62
CMC4P56277 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.16□□□□□ -0.62
CMC4P56277 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 COX5BP1-201ENST00000507622 393 ntBASIC11.16□□□□□ -0.62
CMC4P56277 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.16□□□□□ -0.62
CMC4P56277 AC078819.1-201ENST00000547454 765 ntBASIC11.16□□□□□ -0.62
CMC4P56277 AC012085.1-201ENST00000548270 765 ntBASIC11.16□□□□□ -0.62
CMC4P56277 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
CMC4P56277 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.16□□□□□ -0.62
CMC4P56277 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.16□□□□□ -0.62
CMC4P56277 DIO1-215ENST00000610607 796 ntTSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms