Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.58□□□□□ -0.08
PDX1P52945 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.58□□□□□ -0.08
PDX1P52945 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PDX1P52945 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.58□□□□□ -0.08
PDX1P52945 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.58□□□□□ -0.08
PDX1P52945 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.58□□□□□ -0.08
PDX1P52945 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
PDX1P52945 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.58□□□□□ -0.08
PDX1P52945 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.58□□□□□ -0.08
PDX1P52945 RN7SL190P-201ENST00000582519 257 ntBASIC14.58□□□□□ -0.08
PDX1P52945 AC016629.1-201ENST00000596579 586 ntBASIC14.58□□□□□ -0.08
PDX1P52945 TNRC18P2-201ENST00000417666 2714 ntBASIC14.58□□□□□ -0.08
PDX1P52945 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.58□□□□□ -0.08
PDX1P52945 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
PDX1P52945 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDX1P52945 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 KRT8P4-201ENST00000509735 1454 ntBASIC14.57□□□□□ -0.08
PDX1P52945 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.57□□□□□ -0.08
PDX1P52945 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PDX1P52945 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.57□□□□□ -0.08
PDX1P52945 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 UPF3AP2-201ENST00000457924 1132 ntBASIC14.57□□□□□ -0.08
PDX1P52945 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.57□□□□□ -0.08
PDX1P52945 SERPINA13P-202ENST00000478994 924 ntBASIC14.57□□□□□ -0.08
PDX1P52945 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.57□□□□□ -0.08
PDX1P52945 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 SAMD11P1-201ENST00000571429 661 ntBASIC14.57□□□□□ -0.08
PDX1P52945 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 ZACNP1-201ENST00000612259 710 ntBASIC14.57□□□□□ -0.08
PDX1P52945 AC138649.2-201ENST00000615886 705 ntBASIC14.57□□□□□ -0.08
PDX1P52945 AP001002.3-201ENST00000623482 206 ntBASIC14.57□□□□□ -0.08
PDX1P52945 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.57□□□□□ -0.08
PDX1P52945 AC006058.4-201ENST00000624016 1670 ntBASIC14.57□□□□□ -0.08
PDX1P52945 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.57□□□□□ -0.08
PDX1P52945 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PDX1P52945 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDX1P52945 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms