Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 BX842568.4-201ENST00000421222 227 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 AC107890.1-201ENST00000422478 521 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.68□□□□□ -0.22
HMGA2P52926 AC007969.1-201ENST00000433675 447 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 AC114812.1-204ENST00000449669 728 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 AL589987.1-201ENST00000453380 819 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 RPL13AP25-201ENST00000484130 612 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 AC025678.2-201ENST00000562061 970 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 AC036164.1-201ENST00000570544 333 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.68□□□□□ -0.22
HMGA2P52926 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.68□□□□□ -0.22
HMGA2P52926 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 AC090643.2-201ENST00000623442 2029 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGA2P52926 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGA2P52926 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 MRPL37P1-201ENST00000592451 1337 ntBASIC13.67□□□□□ -0.22
HMGA2P52926 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HMGA2P52926 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGA2P52926 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.67□□□□□ -0.22
HMGA2P52926 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.67□□□□□ -0.22
HMGA2P52926 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.67□□□□□ -0.22
HMGA2P52926 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.67□□□□□ -0.22
HMGA2P52926 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGA2P52926 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.67□□□□□ -0.22
HMGA2P52926 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGA2P52926 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGA2P52926 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGA2P52926 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HMGA2P52926 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HMGA2P52926 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGA2P52926 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGA2P52926 TCAF1P1-201ENST00000414990 2232 ntBASIC13.67□□□□□ -0.22
HMGA2P52926 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGA2P52926 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGA2P52926 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HMGA2P52926 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.66□□□□□ -0.22
HMGA2P52926 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HMGA2P52926 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
HMGA2P52926 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms