Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CPT1AP50416 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.46■□□□□ 0.23
CPT1AP50416 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.46■□□□□ 0.23
CPT1AP50416 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 AC026320.2-201ENST00000434379 478 ntBASIC16.46■□□□□ 0.23
CPT1AP50416 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.46■□□□□ 0.23
CPT1AP50416 RN7SL181P-201ENST00000462921 277 ntBASIC16.46■□□□□ 0.23
CPT1AP50416 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.46■□□□□ 0.23
CPT1AP50416 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.46■□□□□ 0.23
CPT1AP50416 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.46■□□□□ 0.23
CPT1AP50416 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.46■□□□□ 0.23
CPT1AP50416 MIR6769A-201ENST00000617340 73 ntBASIC16.46■□□□□ 0.23
CPT1AP50416 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.46■□□□□ 0.23
CPT1AP50416 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CPT1AP50416 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CPT1AP50416 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
CPT1AP50416 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPT1AP50416 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.46■□□□□ 0.22
CPT1AP50416 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CPT1AP50416 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CPT1AP50416 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CPT1AP50416 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.45■□□□□ 0.22
CPT1AP50416 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CPT1AP50416 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.45■□□□□ 0.22
CPT1AP50416 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.45■□□□□ 0.22
CPT1AP50416 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.45■□□□□ 0.22
CPT1AP50416 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CPT1AP50416 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CPT1AP50416 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CPT1AP50416 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 MIR3188-201ENST00000583494 85 ntBASIC16.45■□□□□ 0.22
CPT1AP50416 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.45■□□□□ 0.22
CPT1AP50416 RN7SL555P-201ENST00000584742 339 ntBASIC16.45■□□□□ 0.22
CPT1AP50416 AL109837.1-201ENST00000603272 613 ntBASIC16.45■□□□□ 0.22
CPT1AP50416 LINC01783-202ENST00000614408 828 ntBASIC16.45■□□□□ 0.22
CPT1AP50416 BX284668.2-205ENST00000619677 828 ntBASIC16.45■□□□□ 0.22
CPT1AP50416 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.45■□□□□ 0.22
CPT1AP50416 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
CPT1AP50416 AL805961.1-201ENST00000642026 753 ntBASIC16.45■□□□□ 0.22
CPT1AP50416 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.45■□□□□ 0.22
CPT1AP50416 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CPT1AP50416 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CPT1AP50416 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
CPT1AP50416 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.45■□□□□ 0.22
CPT1AP50416 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPT1AP50416 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.44■□□□□ 0.22
CPT1AP50416 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CPT1AP50416 OR2K2-202ENST00000374428 1038 ntBASIC16.44■□□□□ 0.22
CPT1AP50416 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CPT1AP50416 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.44■□□□□ 0.22
CPT1AP50416 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.44■□□□□ 0.22
CPT1AP50416 XBP1P1-201ENST00000436573 652 ntBASIC16.44■□□□□ 0.22
CPT1AP50416 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.44■□□□□ 0.22
CPT1AP50416 AC104784.1-201ENST00000473096 294 ntBASIC16.44■□□□□ 0.22
CPT1AP50416 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.44■□□□□ 0.22
CPT1AP50416 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.44■□□□□ 0.22
CPT1AP50416 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.44■□□□□ 0.22
CPT1AP50416 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms