Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.62□□□□□ -0.07
CSNK1EP49674 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 AC026316.1-201ENST00000398900 414 ntBASIC14.62□□□□□ -0.07
CSNK1EP49674 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.62□□□□□ -0.07
CSNK1EP49674 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.62□□□□□ -0.07
CSNK1EP49674 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.62□□□□□ -0.07
CSNK1EP49674 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.62□□□□□ -0.07
CSNK1EP49674 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.62□□□□□ -0.07
CSNK1EP49674 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.62□□□□□ -0.07
CSNK1EP49674 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CSNK1EP49674 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CSNK1EP49674 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.62□□□□□ -0.07
CSNK1EP49674 AP003419.4-201ENST00000616071 517 ntBASIC14.62□□□□□ -0.07
CSNK1EP49674 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.62□□□□□ -0.07
CSNK1EP49674 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 SALL4P5-201ENST00000419001 1760 ntBASIC14.62□□□□□ -0.07
CSNK1EP49674 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
CSNK1EP49674 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.62□□□□□ -0.07
CSNK1EP49674 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CSNK1EP49674 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSNK1EP49674 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.62□□□□□ -0.07
CSNK1EP49674 AP000845.1-201ENST00000581677 2131 ntBASIC14.62□□□□□ -0.07
CSNK1EP49674 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1EP49674 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1EP49674 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1EP49674 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CSNK1EP49674 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 AC239868.1-201ENST00000369385 493 ntBASIC14.61□□□□□ -0.07
CSNK1EP49674 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 AC078875.1-201ENST00000431907 724 ntBASIC14.61□□□□□ -0.07
CSNK1EP49674 NOC2LP1-201ENST00000450578 752 ntBASIC14.61□□□□□ -0.07
CSNK1EP49674 CICP12-201ENST00000455801 843 ntBASIC14.61□□□□□ -0.07
CSNK1EP49674 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 AC104784.1-201ENST00000473096 294 ntBASIC14.61□□□□□ -0.07
CSNK1EP49674 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.61□□□□□ -0.07
CSNK1EP49674 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1EP49674 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1EP49674 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1EP49674 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.61□□□□□ -0.07
CSNK1EP49674 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 AC007718.1-201ENST00000621078 280 ntBASIC14.61□□□□□ -0.07
CSNK1EP49674 AC027601.3-201ENST00000622907 509 ntBASIC14.61□□□□□ -0.07
CSNK1EP49674 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1EP49674 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 KRT8P21-201ENST00000430398 1491 ntBASIC14.61□□□□□ -0.07
CSNK1EP49674 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.61□□□□□ -0.07
CSNK1EP49674 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.61□□□□□ -0.07
CSNK1EP49674 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSNK1EP49674 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1EP49674 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1EP49674 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1EP49674 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1EP49674 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1EP49674 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1EP49674 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1EP49674 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1EP49674 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1EP49674 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1EP49674 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1EP49674 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms