Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 FAM47B-201ENST00000329357 2120 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PCP4P48539 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 AC092447.8-201ENST00000566570 4162 ntBASIC9.83□□□□□ -0.84
PCP4P48539 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 CYP1A1-201ENST00000379727 2685 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
PCP4P48539 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 FCRLA-214ENST00000546024 2077 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 EPHA6-201ENST00000389672 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 STRADA-231ENST00000638708 2153 ntTSL 2 BASIC9.83□□□□□ -0.84
PCP4P48539 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 VPS11-207ENST00000620429 2739 ntTSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC9.83□□□□□ -0.84
PCP4P48539 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC9.83□□□□□ -0.84
PCP4P48539 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC9.83□□□□□ -0.84
PCP4P48539 AC009955.4-201ENST00000597192 544 ntBASIC9.83□□□□□ -0.84
PCP4P48539 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
PCP4P48539 GOLM1-202ENST00000388711 3022 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 LINC00330-201ENST00000414562 2036 ntTSL 2 BASIC9.83□□□□□ -0.84
PCP4P48539 AL512274.1-201ENST00000562471 2027 ntBASIC9.83□□□□□ -0.84
PCP4P48539 AL772363.1-201ENST00000371390 3222 ntTSL 2 BASIC9.83□□□□□ -0.84
PCP4P48539 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PCP4P48539 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC9.83□□□□□ -0.84
PCP4P48539 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 PCSK2-201ENST00000262545 4740 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 ZNF619-204ENST00000447116 4153 ntAPPRIS P4 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 JAK1-201ENST00000342505 5047 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC9.83□□□□□ -0.84
PCP4P48539 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 ZNF493-208ENST00000599461 1769 ntBASIC9.83□□□□□ -0.84
PCP4P48539 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
PCP4P48539 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PCP4P48539 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PCP4P48539 NDUFB4P11-202ENST00000600530 2079 ntBASIC9.83□□□□□ -0.84
PCP4P48539 TMBIM1-214ENST00000444881 2936 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
PCP4P48539 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 AP000350.6-201ENST00000609510 5637 ntBASIC9.82□□□□□ -0.84
PCP4P48539 PAMR1-209ENST00000622144 2785 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 EIF4B-203ENST00000420463 1936 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 PTCD2-211ENST00000536805 1911 ntTSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 AC068775.1-201ENST00000322446 2142 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 ENPP5-201ENST00000230565 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 ATP9B-201ENST00000307671 3533 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC9.82□□□□□ -0.84
PCP4P48539 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 C1RL-AS1-201ENST00000382215 2086 ntTSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 CLN3-238ENST00000569430 3867 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms