Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 WASH4P-201ENST00000564273 1246 ntBASIC15.23■□□□□ 0.03
HADHAP40939 AP001063.1-201ENST00000568332 529 ntBASIC15.23■□□□□ 0.03
HADHAP40939 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.23■□□□□ 0.03
HADHAP40939 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.23■□□□□ 0.03
HADHAP40939 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.23■□□□□ 0.03
HADHAP40939 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 AL035252.4-201ENST00000624174 288 ntBASIC15.23■□□□□ 0.03
HADHAP40939 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.23■□□□□ 0.03
HADHAP40939 AL603764.1-201ENST00000636452 321 ntBASIC15.23■□□□□ 0.03
HADHAP40939 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 AC018529.2-202ENST00000611482 3087 ntBASIC15.23■□□□□ 0.03
HADHAP40939 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
HADHAP40939 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HADHAP40939 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 KRT8P14-201ENST00000414254 1442 ntBASIC15.23■□□□□ 0.03
HADHAP40939 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 BX640514.1-201ENST00000583223 1918 ntBASIC15.23■□□□□ 0.03
HADHAP40939 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HADHAP40939 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.23■□□□□ 0.03
HADHAP40939 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.23■□□□□ 0.03
HADHAP40939 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.22■□□□□ 0.03
HADHAP40939 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 AL157414.3-201ENST00000624276 1954 ntBASIC15.22■□□□□ 0.03
HADHAP40939 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.22■□□□□ 0.03
HADHAP40939 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HADHAP40939 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.22■□□□□ 0.03
HADHAP40939 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HADHAP40939 DGCR5-201ENST00000399539 862 ntBASIC15.22■□□□□ 0.03
HADHAP40939 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 AP006294.1-201ENST00000415407 339 ntBASIC15.22■□□□□ 0.03
HADHAP40939 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.22■□□□□ 0.03
HADHAP40939 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.22■□□□□ 0.03
HADHAP40939 GAPDHP21-201ENST00000450301 1010 ntBASIC15.22■□□□□ 0.03
HADHAP40939 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.22■□□□□ 0.03
HADHAP40939 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.22■□□□□ 0.03
HADHAP40939 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HADHAP40939 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HADHAP40939 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.22■□□□□ 0.03
HADHAP40939 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.22■□□□□ 0.03
HADHAP40939 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.22■□□□□ 0.03
HADHAP40939 CR383656.12-201ENST00000549567 513 ntBASIC15.22■□□□□ 0.03
HADHAP40939 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.22■□□□□ 0.03
HADHAP40939 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.22■□□□□ 0.03
HADHAP40939 AC009486.1-201ENST00000569860 813 ntBASIC15.22■□□□□ 0.03
HADHAP40939 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.22■□□□□ 0.03
HADHAP40939 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.22■□□□□ 0.03
HADHAP40939 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HADHAP40939 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 SNX18-202ENST00000343017 3140 ntBASIC15.22■□□□□ 0.03
HADHAP40939 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HADHAP40939 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.22■□□□□ 0.03
HADHAP40939 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HADHAP40939 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HADHAP40939 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HADHAP40939 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HADHAP40939 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HADHAP40939 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HADHAP40939 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HADHAP40939 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.21■□□□□ 0.03
HADHAP40939 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HADHAP40939 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.21■□□□□ 0.03
HADHAP40939 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HADHAP40939 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.21■□□□□ 0.03
HADHAP40939 HLA-K-203ENST00000430151 1046 ntBASIC15.21■□□□□ 0.03
HADHAP40939 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms