Protein–RNA interactions for Protein: P26992

CNTFR, Ciliary neurotrophic factor receptor subunit alpha, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFRP26992 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CNTFRP26992 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CNTFRP26992 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
CNTFRP26992 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.12□□□□□ -0.47
CNTFRP26992 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CNTFRP26992 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.12□□□□□ -0.47
CNTFRP26992 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.12□□□□□ -0.47
CNTFRP26992 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CNTFRP26992 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CNTFRP26992 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CNTFRP26992 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 KRT8P35-201ENST00000483942 1338 ntBASIC12.11□□□□□ -0.47
CNTFRP26992 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.11□□□□□ -0.47
CNTFRP26992 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.11□□□□□ -0.47
CNTFRP26992 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.11□□□□□ -0.47
CNTFRP26992 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.11□□□□□ -0.47
CNTFRP26992 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 INE1-201ENST00000456273 945 ntBASIC12.11□□□□□ -0.47
CNTFRP26992 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.11□□□□□ -0.47
CNTFRP26992 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.11□□□□□ -0.47
CNTFRP26992 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.11□□□□□ -0.47
CNTFRP26992 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.11□□□□□ -0.47
CNTFRP26992 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.11□□□□□ -0.47
CNTFRP26992 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.11□□□□□ -0.47
CNTFRP26992 DUX4L47-201ENST00000566374 394 ntBASIC12.11□□□□□ -0.47
CNTFRP26992 MIR5189-201ENST00000577370 114 ntBASIC12.11□□□□□ -0.47
CNTFRP26992 AC132938.2-201ENST00000579188 680 ntBASIC12.11□□□□□ -0.47
CNTFRP26992 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.11□□□□□ -0.47
CNTFRP26992 AC027307.3-201ENST00000594262 1100 ntBASIC12.11□□□□□ -0.47
CNTFRP26992 AC004466.1-201ENST00000599515 1080 ntBASIC12.11□□□□□ -0.47
CNTFRP26992 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.11□□□□□ -0.47
CNTFRP26992 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 AL591163.1-201ENST00000641757 987 ntBASIC12.11□□□□□ -0.47
CNTFRP26992 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 AC140479.7-201ENST00000636301 2332 ntBASIC12.11□□□□□ -0.47
CNTFRP26992 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CNTFRP26992 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.11□□□□□ -0.47
CNTFRP26992 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CNTFRP26992 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CNTFRP26992 AC232323.1-201ENST00000540724 2099 ntBASIC12.1□□□□□ -0.47
CNTFRP26992 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.1□□□□□ -0.47
CNTFRP26992 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
CNTFRP26992 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.1□□□□□ -0.47
CNTFRP26992 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CNTFRP26992 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CNTFRP26992 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.1□□□□□ -0.47
CNTFRP26992 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.1□□□□□ -0.47
CNTFRP26992 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 AC023908.3-201ENST00000564211 3047 ntBASIC12.1□□□□□ -0.47
CNTFRP26992 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.1□□□□□ -0.47
CNTFRP26992 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CNTFRP26992 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.1□□□□□ -0.47
CNTFRP26992 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.1□□□□□ -0.47
CNTFRP26992 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CNTFRP26992 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms