Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.62□□□□□ -0.39
CXCL3P19876 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.62□□□□□ -0.39
CXCL3P19876 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.62□□□□□ -0.39
CXCL3P19876 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.62□□□□□ -0.39
CXCL3P19876 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL3P19876 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CXCL3P19876 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.62□□□□□ -0.39
CXCL3P19876 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL3P19876 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL3P19876 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 RN7SL832P-201ENST00000607781 1756 ntBASIC12.61□□□□□ -0.39
CXCL3P19876 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 MEX3B-202ENST00000558133 4333 ntBASIC12.61□□□□□ -0.39
CXCL3P19876 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.61□□□□□ -0.39
CXCL3P19876 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CXCL3P19876 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CXCL3P19876 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.61□□□□□ -0.39
CXCL3P19876 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.61□□□□□ -0.39
CXCL3P19876 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.61□□□□□ -0.39
CXCL3P19876 SAPCD2P3-201ENST00000455031 850 ntBASIC12.61□□□□□ -0.39
CXCL3P19876 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 AC136632.2-201ENST00000512891 861 ntBASIC12.61□□□□□ -0.39
CXCL3P19876 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.61□□□□□ -0.39
CXCL3P19876 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.61□□□□□ -0.39
CXCL3P19876 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.61□□□□□ -0.39
CXCL3P19876 AC021087.4-201ENST00000563761 564 ntBASIC12.61□□□□□ -0.39
CXCL3P19876 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.61□□□□□ -0.39
CXCL3P19876 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.61□□□□□ -0.39
CXCL3P19876 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CXCL3P19876 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.61□□□□□ -0.39
CXCL3P19876 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 AL022323.5-201ENST00000624101 2059 ntBASIC12.61□□□□□ -0.39
CXCL3P19876 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL3P19876 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL3P19876 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.61□□□□□ -0.39
CXCL3P19876 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.6□□□□□ -0.39
CXCL3P19876 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CXCL3P19876 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CXCL3P19876 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CXCL3P19876 AKR1C7P-201ENST00000305623 895 ntBASIC12.6□□□□□ -0.39
CXCL3P19876 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.6□□□□□ -0.39
CXCL3P19876 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.6□□□□□ -0.39
CXCL3P19876 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CXCL3P19876 AZGP1P1-201ENST00000411909 902 ntBASIC12.6□□□□□ -0.39
CXCL3P19876 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.6□□□□□ -0.39
CXCL3P19876 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms