Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPRAP18433 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPRAP18433 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPRAP18433 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPRAP18433 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPRAP18433 KRT8P31-201ENST00000504812 1408 ntBASIC17.12■□□□□ 0.33
PTPRAP18433 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPRAP18433 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPRAP18433 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPRAP18433 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPRAP18433 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPRAP18433 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTPRAP18433 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTPRAP18433 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 AL807761.2-201ENST00000422849 729 ntBASIC17.11■□□□□ 0.33
PTPRAP18433 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPRAP18433 AL627422.1-201ENST00000434104 580 ntBASIC17.11■□□□□ 0.33
PTPRAP18433 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.11■□□□□ 0.33
PTPRAP18433 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 AC079112.1-201ENST00000454972 939 ntBASIC17.11■□□□□ 0.33
PTPRAP18433 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPRAP18433 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPRAP18433 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPRAP18433 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPRAP18433 AC009560.1-201ENST00000620208 434 ntBASIC17.11■□□□□ 0.33
PTPRAP18433 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
PTPRAP18433 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPRAP18433 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPRAP18433 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPRAP18433 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PTPRAP18433 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PTPRAP18433 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPRAP18433 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPRAP18433 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPRAP18433 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTPRAP18433 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPRAP18433 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 CHCHD2P9-201ENST00000461726 456 ntBASIC17.1■□□□□ 0.33
PTPRAP18433 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPRAP18433 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPRAP18433 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPRAP18433 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPRAP18433 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPRAP18433 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPRAP18433 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPRAP18433 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPRAP18433 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PTPRAP18433 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPRAP18433 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPRAP18433 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
PTPRAP18433 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PTPRAP18433 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PTPRAP18433 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.09■□□□□ 0.33
PTPRAP18433 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPRAP18433 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
PTPRAP18433 AL627389.1-201ENST00000413508 1182 ntBASIC17.09■□□□□ 0.33
PTPRAP18433 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPRAP18433 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPRAP18433 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPRAP18433 CTBP2P4-201ENST00000513884 920 ntBASIC17.09■□□□□ 0.33
PTPRAP18433 AC114947.1-202ENST00000514136 344 ntBASIC17.09■□□□□ 0.33
PTPRAP18433 AC007326.1-201ENST00000604539 458 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms