Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH1P12830 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH1P12830 AL139094.1-201ENST00000405549 1188 ntBASIC14.68□□□□□ -0.06
CDH1P12830 AL035633.1-201ENST00000406139 838 ntBASIC14.68□□□□□ -0.06
CDH1P12830 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.68□□□□□ -0.06
CDH1P12830 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.68□□□□□ -0.06
CDH1P12830 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.68□□□□□ -0.06
CDH1P12830 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 AL596325.1-201ENST00000563991 1082 ntBASIC14.68□□□□□ -0.06
CDH1P12830 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH1P12830 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 AC006504.5-208ENST00000588784 2401 ntBASIC14.68□□□□□ -0.06
CDH1P12830 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CDH1P12830 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH1P12830 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH1P12830 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH1P12830 AL137783.1-201ENST00000623494 1896 ntBASIC14.67□□□□□ -0.06
CDH1P12830 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH1P12830 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
CDH1P12830 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CDH1P12830 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH1P12830 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH1P12830 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH1P12830 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH1P12830 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH1P12830 KLF2P2-201ENST00000416807 1039 ntBASIC14.67□□□□□ -0.06
CDH1P12830 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.67□□□□□ -0.06
CDH1P12830 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH1P12830 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH1P12830 AC093433.1-201ENST00000458048 571 ntBASIC14.67□□□□□ -0.06
CDH1P12830 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH1P12830 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH1P12830 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH1P12830 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH1P12830 AP005019.2-201ENST00000615104 511 ntBASIC14.67□□□□□ -0.06
CDH1P12830 RPSAP52-203ENST00000622976 1023 ntBASIC14.67□□□□□ -0.06
CDH1P12830 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
CDH1P12830 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH1P12830 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH1P12830 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH1P12830 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH1P12830 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 KRT8P14-201ENST00000414254 1442 ntBASIC14.66□□□□□ -0.06
CDH1P12830 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms