Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM1P09493 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TPM1P09493 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM1P09493 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM1P09493 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
TPM1P09493 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM1P09493 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM1P09493 CICP20-201ENST00000443330 2801 ntBASIC16.63■□□□□ 0.25
TPM1P09493 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM1P09493 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TPM1P09493 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.62■□□□□ 0.25
TPM1P09493 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TPM1P09493 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TPM1P09493 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM1P09493 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TPM1P09493 TOMM22P5-201ENST00000416399 439 ntBASIC16.62■□□□□ 0.25
TPM1P09493 RPL13P2-201ENST00000440687 659 ntBASIC16.62■□□□□ 0.25
TPM1P09493 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TPM1P09493 FDX1P1-201ENST00000449115 551 ntBASIC16.62■□□□□ 0.25
TPM1P09493 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM1P09493 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.62■□□□□ 0.25
TPM1P09493 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM1P09493 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM1P09493 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.62■□□□□ 0.25
TPM1P09493 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM1P09493 AF228730.6-201ENST00000641497 218 ntBASIC16.62■□□□□ 0.25
TPM1P09493 AC084121.3-201ENST00000641716 218 ntBASIC16.62■□□□□ 0.25
TPM1P09493 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM1P09493 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.62■□□□□ 0.25
TPM1P09493 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM1P09493 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TPM1P09493 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM1P09493 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TPM1P09493 AC011474.4-201ENST00000623523 2076 ntBASIC16.61■□□□□ 0.25
TPM1P09493 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.61■□□□□ 0.25
TPM1P09493 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TPM1P09493 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TPM1P09493 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 STRCP1-201ENST00000509801 5328 ntBASIC16.61■□□□□ 0.25
TPM1P09493 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TPM1P09493 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TPM1P09493 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
TPM1P09493 AC004066.1-201ENST00000502488 802 ntBASIC16.61■□□□□ 0.25
TPM1P09493 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.61■□□□□ 0.25
TPM1P09493 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC16.61■□□□□ 0.25
TPM1P09493 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TPM1P09493 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.61■□□□□ 0.25
TPM1P09493 AC018665.1-201ENST00000622927 1362 ntBASIC16.61■□□□□ 0.25
TPM1P09493 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TPM1P09493 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.61■□□□□ 0.25
TPM1P09493 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.61■□□□□ 0.25
TPM1P09493 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TPM1P09493 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
TPM1P09493 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms