Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.71■□□□□ 0.11
RB1P06400 NDUFS6P1-201ENST00000485187 316 ntBASIC15.71■□□□□ 0.11
RB1P06400 AC131206.1-201ENST00000538078 1211 ntBASIC15.71■□□□□ 0.11
RB1P06400 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.71■□□□□ 0.11
RB1P06400 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.71■□□□□ 0.11
RB1P06400 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.71■□□□□ 0.11
RB1P06400 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.71■□□□□ 0.11
RB1P06400 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.71■□□□□ 0.11
RB1P06400 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
RB1P06400 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RB1P06400 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.71■□□□□ 0.11
RB1P06400 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RB1P06400 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.71■□□□□ 0.11
RB1P06400 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.71■□□□□ 0.11
RB1P06400 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RB1P06400 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RB1P06400 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RB1P06400 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RB1P06400 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RB1P06400 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RB1P06400 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
RB1P06400 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.7■□□□□ 0.1
RB1P06400 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.7■□□□□ 0.1
RB1P06400 CICP13-201ENST00000422015 2789 ntBASIC15.7■□□□□ 0.1
RB1P06400 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RB1P06400 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
RB1P06400 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RB1P06400 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.7■□□□□ 0.1
RB1P06400 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
RB1P06400 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RB1P06400 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.7■□□□□ 0.1
RB1P06400 LYPLA2P1-203ENST00000447689 696 ntBASIC15.7■□□□□ 0.1
RB1P06400 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.7■□□□□ 0.1
RB1P06400 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.7■□□□□ 0.1
RB1P06400 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.7■□□□□ 0.1
RB1P06400 MIR4522-201ENST00000584932 87 ntBASIC15.7■□□□□ 0.1
RB1P06400 AC005357.2-202ENST00000590507 1060 ntBASIC15.7■□□□□ 0.1
RB1P06400 AL161773.1-201ENST00000624845 863 ntBASIC15.7■□□□□ 0.1
RB1P06400 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.7■□□□□ 0.1
RB1P06400 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.7■□□□□ 0.1
RB1P06400 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RB1P06400 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.7■□□□□ 0.1
RB1P06400 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RB1P06400 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.7■□□□□ 0.1
RB1P06400 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RB1P06400 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RB1P06400 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
RB1P06400 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RB1P06400 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RB1P06400 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.69■□□□□ 0.1
RB1P06400 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.69■□□□□ 0.1
RB1P06400 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 AL139384.1-201ENST00000612143 3047 ntBASIC15.69■□□□□ 0.1
RB1P06400 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.69■□□□□ 0.1
RB1P06400 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.69■□□□□ 0.1
RB1P06400 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.69■□□□□ 0.1
RB1P06400 AC092638.2-201ENST00000441105 947 ntBASIC15.69■□□□□ 0.1
RB1P06400 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 FTH1P22-201ENST00000456305 520 ntBASIC15.69■□□□□ 0.1
RB1P06400 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.69■□□□□ 0.1
RB1P06400 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RB1P06400 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RB1P06400 AC007326.1-201ENST00000604539 458 ntBASIC15.69■□□□□ 0.1
RB1P06400 AP001184.1-201ENST00000637936 376 ntBASIC15.69■□□□□ 0.1
RB1P06400 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RB1P06400 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.69■□□□□ 0.1
RB1P06400 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RB1P06400 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms